---
title: peptides_soluble
canonical_url: "https://www.modelscope.cn/datasets/jablonkagroup/peptides_soluble"
md_url: "https://www.modelscope.cn/datasets/jablonkagroup/peptides_soluble.md"
repository: jablonkagroup/peptides_soluble
last_updated: 2025-05-27
license: "Apache License 2.0"
storage_size: "141 MB"
downloads: 783
stars: 0
---

# peptides_soluble

> peptides_soluble - jablonkagroup 在 ModelScope 开源的数据集。Solubility was estimated by retrospective analysis of electronic laboratory notebooks. The notebooks were part of a large effort called the Protein Structure Initiative and consider sequences linearly…

jablonkagroup/peptides_soluble 是 ModelScope 魔搭社区上的数据集，存储大小 141 MB，采用 Apache License 2.0 许可。

- **Repository**: jablonkagroup/peptides_soluble
- **License**: Apache License 2.0
- **Storage size**: 141 MB
- **Downloads**: 783
- **Stars**: 0
- **Last updated**: 2025-05-27

Source: https://www.modelscope.cn/datasets/jablonkagroup/peptides_soluble

---

## Dataset Details

### Dataset Description

Solubility was estimated by retrospective analysis of electronic laboratory notebooks.
The notebooks were part of a large effort called the Protein Structure Initiative and consider sequences
linearly through the following stages: Selected,  Cloned,  Expressed,  Soluble,  Purified, Crystallized,
HSQC (heteronuclear single quantum coherence), Structure, and deposited in PDB. The peptides were identified
as soluble or insoluble by "Comparing the experimental status at two time points, September 2009 and May 2010,
we were able to derive a set of insoluble proteins defined as those which were not
soluble in September 2009 and still remained in that state 8 months later."

- **Curated by:**
- **License:** CC BY 4.0

### Dataset Sources

- [corresponding publication](https://doi.org/10.1021/acs.jcim.2c01317)
- [data source](https://doi.org/10.1111/j.1742-4658.2012.08603.x)

## Citation

<!-- If there is a paper or blog post introducing the dataset, the APA and Bibtex information for that should go in this section. -->

**BibTeX:**

```bibtex
@article{berman2009protein,
        title={The protein structure initiative structural genomics knowledgebase},
        author={Berman, Helen M and Westbrook, John D and Gabanyi, Margaret J and Tao,
          Wendy and Shah, Raship and Kouranov, Andrei and Schwede, Torsten and Arnold,
            Konstantin and Kiefer, Florian and Bordoli, Lorenza and others},
        journal={Nucleic acids research},
        volume={37},
        number={suppl1},
        pages={D365--D368},
        year={2009},
        publisher={Oxford University Press}
@article{smialowski2012proso,
        title={PROSO II--a new method for protein solubility prediction},
        author={Smialowski, Pawel and Doose, Gero and Torkler, Phillipp and Kaufmann,
          Stefanie and Frishman, Dmitrij},
        journal={The FEBS journal},
        volume={279},
        number={12},
        pages={2192--2200},
        year={2012},
        publisher={Wiley Online Library}
```